PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cz08g24200.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris
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Family | C2H2 | ||||||||
Protein Properties | Length: 134aa MW: 14974.2 Da PI: 9.5605 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.4 | 2.5e-05 | 14 | 35 | 3 | 23 |
ETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 CpdCgksFsrksnLkrHirt.H 23 C +C++ Fs+ +L++H+++ H Cz08g24200.t1 14 CFYCDRLFSDEATLVQHQKNkH 35 99*****************988 PP | |||||||
2 | zf-C2H2 | 16.1 | 3.2e-05 | 36 | 56 | 1 | 21 |
EEETTTTEEESSHHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHir 21 ykCpdC++ ++ L++H Cz08g24200.t1 36 YKCPDCNRKLNTAQGLVVHAY 56 9******************76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 134 aa Download sequence |
MGKKKKRIDD KPWCFYCDRL FSDEATLVQH QKNKHYKCPD CNRKLNTAQG LVVHAYQVHK 60 LNITAIPGAK PGRESTDREI FGMAGIPEGA RPGAPFGEGE RLRHLALHGL TPGIAFHDTR 120 NVCLTHQPMP YNV* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 4 | 34 | KKKRIDDKPWCFYCDRLFSDEATLVQHQKNK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30970.1 | 6e-37 | C2H2 family protein |