PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz07g28090.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

MYB

Protein Properties

Length: 762aa MW: 82761.4 Da PI: 9.8907

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz07g28090.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.4	1e-10	375	415	2	45
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 g+WT+ Ede+l+ ++++ G + Wk I +g R ++ c++rw+ Cz07g28090.t1 375 GPWTPAEDEQLAALITEKGRK-WKEIGGSIG--RYPEACRDRWR 415 89***************99.****8..********7 PP
2	Myb_DNA-binding	25.7	2.7e-08	426	499	2	47
SSS-HHHHHHHHHHHHHTTTT.............................-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg.............................tWktIartmgkgRtlkqcksrwqky 47 g+W+++E +l +v+ + + +W++Ia++mg +R qc ++w+++ Cz07g28090.t1 426 GAWSPDELTKLETLVNAYLSAkpsgtrtiqspskgddqgrpdgrivlddvDWELIAQKMG-TRNVLQCMEKWYMH 499 89**************9889999*******************************.**********87 PP

Sequence ? help Back to Top
Protein Sequence Length: 762 aa Download sequence
MVVDSSAVAN ALVGVLQKCA DGKLKRSKAC RKVIKQLKKK SNVDIDEEGL ANMLTEVLAD 60 SRVQQDGKYL LLKDATSALE APGTPPAIKD EIHPPPAAFK EEHSTHSGAH IASDQHDKAA 120 NGIGRAGGPH GTHLENHDAQ PPRKRARKHH KFDASEQALA PVAPAPAQPS QVHPAVANAT 180 ADNVGDHANV SQRKAAAPKP PKHAAASAHP AVATSVAANG AAEHVCDHAA GHDMPAESVQ 240 QRQQSGHTAS TSVMNGDAPA AAGAGSAKRP RKNRTSKKEA ASRDSSITRW REDYNRMDVK 300 HGRFTESEKQ ALSDAAEEYA TANGLSTTNY DWLWTASADG RRGSMTAIAA AAPHRTRKAV 360 WAFLRRHLSA NARQGPWTPA EDEQLAALIT EKGRKWKEIG GSIGRYPEAC RDRWRIIMHA 420 DKRVTGAWSP DELTKLETLV NAYLSAKPSG TRTIQSPSKG DDQGRPDGRI VLDDVDWELI 480 AQKMGTRNVL QCMEKWYMHV SQTMMEKGEW GAGDDKTMFE KLLTTLPKHE FEVDWDQLVP 540 GRTADQSRRR WRVLLKHAPS NLRWDFDLAY HFIAGKYFPK MLDRIQKSRA ATPQHSAMGD 600 AAAAAAHSEA PGPSQPLAQE PFRHAQQHPS VTDAAAAGAD NYGGDSREKG TLHKKHKQKH 660 VGAAVAEHGT DTGSNLLMAD GHNDAADSQH GQRKNKKTKR HRDDAERQQK QQQQPPQVVN 720 GKQQSVNANK HKESKQLHAL IGSCHQGNAV ESALLPTATG F*

Sequence ? help Back to Top

Protein Sequence Length: 762 aa Download sequence

MVVDSSAVAN ALVGVLQKCA DGKLKRSKAC RKVIKQLKKK SNVDIDEEGL ANMLTEVLAD  60
SRVQQDGKYL LLKDATSALE APGTPPAIKD EIHPPPAAFK EEHSTHSGAH IASDQHDKAA  120
NGIGRAGGPH GTHLENHDAQ PPRKRARKHH KFDASEQALA PVAPAPAQPS QVHPAVANAT  180
ADNVGDHANV SQRKAAAPKP PKHAAASAHP AVATSVAANG AAEHVCDHAA GHDMPAESVQ  240
QRQQSGHTAS TSVMNGDAPA AAGAGSAKRP RKNRTSKKEA ASRDSSITRW REDYNRMDVK  300
HGRFTESEKQ ALSDAAEEYA TANGLSTTNY DWLWTASADG RRGSMTAIAA AAPHRTRKAV  360
WAFLRRHLSA NARQGPWTPA EDEQLAALIT EKGRKWKEIG GSIGRYPEAC RDRWRIIMHA  420
DKRVTGAWSP DELTKLETLV NAYLSAKPSG TRTIQSPSKG DDQGRPDGRI VLDDVDWELI  480
AQKMGTRNVL QCMEKWYMHV SQTMMEKGEW GAGDDKTMFE KLLTTLPKHE FEVDWDQLVP  540
GRTADQSRRR WRVLLKHAPS NLRWDFDLAY HFIAGKYFPK MLDRIQKSRA ATPQHSAMGD  600
AAAAAAHSEA PGPSQPLAQE PFRHAQQHPS VTDAAAAGAD NYGGDSREKG TLHKKHKQKH  660
VGAAVAEHGT DTGSNLLMAD GHNDAADSQH GQRKNKKTKR HRDDAERQQK QQQQPPQVVN  720
GKQQSVNANK HKESKQLHAL IGSCHQGNAV ESALLPTATG F*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41020.1	2e-21	MYB_related family protein