PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cz06g37150.t1

Organism

Chromochloris zofingiensis

Taxonomic ID

31302

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Sphaeropleales; Chromochloridaceae; Chromochloris

Family

GATA

Protein Properties

Length: 659aa MW: 69946.1 Da PI: 7.7988

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cz06g37150.t1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	57.5	1.8e-18	612	644	1	33
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkk 33 C nCgt +Tp+WR+gp+g++tLCnaCG++y+k Cz06g37150.t1 612 CLNCGTHQTPQWRSGPNGPRTLCNACGVRYKKG 644 99*****************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 659 aa Download sequence
MATHSSGWCD SSYRLQVRGC TAMTDFSYCS RMHGPGSLQQ HVHASQRQTS TEISHLPSLE 60 HRPLRRYTSD TYLLQNPVPL YKQRGQQHCG SAVRHQNNSV SPALLRTISA PSEHSVQQKQ 120 GVALFGPMIE LDGQPSASTY EEQPQMQSSA ALDDYPQQSA LHCSQLTCST NFRHQRTGSY 180 GQLTHTVQQH PAYNHQQQQP TCYQMSTGCQ HGAELQQPGN QSAPCIQHQS SYGSTPAFSA 240 EAATGTGSCC SASFPPLSNA MLAHCVMPEV VSDASCTDGF YNCSNTVAGT CAVTDGMLER 300 LFEEAEGMFG NLVDACMINA EAPVHMMHTP QLSPVVQYNP QQQHMPAAGI HTSPFPGNAG 360 VLDTPTSQHV DRWCNCQFSP PPSIDTALRT CESFVNINSL SAPQPAAAAC MPLSGDAGEM 420 MSGQSAPRIR LKVQCRSTKL SPPAASTVVQ PPCSSTLESA VVHSPNKHVK SFAMSRTLSM 480 SSTSGAGVHK PQHSKAGVLP QVAAELVDVM LASNSLGGSH HTTTQVQLPL AGSGGSGVTT 540 SGQIHGGVGG STMSGSDGAA APSDSTTSSD GNEVAVADST WTSEPLVRTL SKSKRSHKRR 600 QAAKSKGRKG NCLNCGTHQT PQWRSGPNGP RTLCNACGVR YKKGLPLQAT RHEEMVVA*

Sequence ? help Back to Top

Protein Sequence Length: 659 aa Download sequence

MATHSSGWCD SSYRLQVRGC TAMTDFSYCS RMHGPGSLQQ HVHASQRQTS TEISHLPSLE  60
HRPLRRYTSD TYLLQNPVPL YKQRGQQHCG SAVRHQNNSV SPALLRTISA PSEHSVQQKQ  120
GVALFGPMIE LDGQPSASTY EEQPQMQSSA ALDDYPQQSA LHCSQLTCST NFRHQRTGSY  180
GQLTHTVQQH PAYNHQQQQP TCYQMSTGCQ HGAELQQPGN QSAPCIQHQS SYGSTPAFSA  240
EAATGTGSCC SASFPPLSNA MLAHCVMPEV VSDASCTDGF YNCSNTVAGT CAVTDGMLER  300
LFEEAEGMFG NLVDACMINA EAPVHMMHTP QLSPVVQYNP QQQHMPAAGI HTSPFPGNAG  360
VLDTPTSQHV DRWCNCQFSP PPSIDTALRT CESFVNINSL SAPQPAAAAC MPLSGDAGEM  420
MSGQSAPRIR LKVQCRSTKL SPPAASTVVQ PPCSSTLESA VVHSPNKHVK SFAMSRTLSM  480
SSTSGAGVHK PQHSKAGVLP QVAAELVDVM LASNSLGGSH HTTTQVQLPL AGSGGSGVTT  540
SGQIHGGVGG STMSGSDGAA APSDSTTSSD GNEVAVADST WTSEPLVRTL SKSKRSHKRR  600
QAAKSKGRKG NCLNCGTHQT PQWRSGPNGP RTLCNACGVR YKKGLPLQAT RHEEMVVA*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	594	601	KRSHKRRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32890.1	5e-14	GATA family protein