PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY69607.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ERF | ||||||||
Protein Properties | Length: 140aa MW: 15632.6 Da PI: 9.5713 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.1 | 2.6e-19 | 60 | 111 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 ++GVr ++ +g+++AeIrd g k+ +r++lg+++t+e+Aa a+++a+ k++g GAY69607.1 60 SFRGVRKRP-WGKFAAEIRD----GkkKTgARVWLGTYDTPEDAALAYDRAAFKIHG 111 59*******.**********....333336*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 140 aa Download sequence |
MNAQNISDSE FAILDSIRRY LLDDIPILLP SETSSGNNNN VTASSDVACF NMQLRRPQKS 60 FRGVRKRPWG KFAAEIRDGK KKTGARVWLG TYDTPEDAAL AYDRAAFKIH GQKAKLNFPH 120 LIGSKSSNTE CWLTESPNAD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 1e-35 | ERF family protein |