PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY69348.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 361aa    MW: 40132.6 Da    PI: 8.7202
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY69348.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.91.6e-20175224255
         AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr ++ +g+W+AeIrd +     + +r++lg+f+tae+Aa+a+++a+++++g
  GAY69348.1 175 RYRGVRHRP-WGKWAAEIRDpF-----KaARVWLGTFDTAEDAARAYDEAALRFRG 224
                 7*****888.**********66.....56*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MIKVANQQID KKKQKKDSHQ ERLSEVDQPL MQYSDDDQRR RRWKECEMSA MVSALKHVVA  60
GDTDVVVSQA QQMQQNDYNM KVTAVTSSVG NSSSSSSRTG SGQKRAREME GGANFSSRPE  120
REVDELSHVT AGSVCVVTAG TERLSISAST RMQAEAIYEY NSNKKSVRVQ EPGRRYRGVR  180
HRPWGKWAAE IRDPFKAARV WLGTFDTAED AARAYDEAAL RFRGNKAKLN FPENVKLAKS  240
SPNANSVAAQ LTISDSTTTL LPISTPSEPI VHCQALDHYV PNTEVSSDFR DYSFLVSDFA  300
EFQRQPMSSY LSSASSPLRL TSSHPFPGQP PVQFMPAKTE SDSAEFSIPP WNASSYYPPS  360
G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.12e-27ERF family protein