PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY67972.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 235aa MW: 26745 Da PI: 6.7978 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 29.7 | 1.8e-09 | 4 | 77 | 56 | 128 |
NAM 56 kewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +yfF++ +k++++++r n ++ W+ + k vl+ +++ g kk + + r++ ++ +W+mhe+++ GAY67972.1 4 QALYFFTQLKKASPKDSRFNIKIGLDAWQGEDRAKLVLTVgsEDQILGFKKRFRYE-SRENLEQNGRWIMHEFTI 77 568******************99999******99999998667777********97.6777779*********86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MAGQALYFFT QLKKASPKDS RFNIKIGLDA WQGEDRAKLV LTVGSEDQIL GFKKRFRYES 60 RENLEQNGRW IMHEFTINPA LLGDQYSHKA RNFVLCRVKK NKLENHLEKA NLGGKRSSGS 120 KRKLKEVVTS SSHIDHDDEC FQSKRLKAHQ NSVLIEQSHS PCSSSSLHTV EHQGEIDNIL 180 EIVEFEVEID YLPNRLVFNV QEFLSELDQI AEPRDEEKGD GAAAGRVSIE SQSST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62380.1 | 8e-07 | NAC family protein |