PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY67704.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

FAR1

Protein Properties

Length: 337aa MW: 38305.7 Da PI: 6.5858

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY67704.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	49.8	1.1e-15	58	131	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn YAke GF r ++ + ++ Cs g++++++ + +r+etr gC a+++ +++++++w+++++eleHnH l+p GAY67704.1 58 FYNCYAKEQGFGSREKY-----------RGKLSCSSAGFKKKSEAN-----CPRPETRAGCPAMIEFRLMETKRWRIIEVELEHNHLLSP 131 9********988764...........4578*****99888.....9********************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
VDEVSLNTKP VGDDDTDDFE VVGDCAMTEY VGQTGITPNP LPPAVGMEFE TYDDVYYFYN 60 CYAKEQGFGS REKYRGKLSC SSAGFKKKSE ANCPRPETRA GCPAMIEFRL METKRWRIIE 120 VELEHNHLLS PRSGKFYKSH KHTGIGTKRT LHLDGAEEVQ KIRLSNQLKL KPGDAQAVQS 180 FFCRLQLTDP NFFNVVDLNE KGCLRNLFWT DTRSRVAYRY FGDVVLIDTT CLTERYDVPL 240 VSFIGVNHHG QSVLLGCGLL ASETIESYTW LFRAWLTCML GRSPQTIITD QCRILQIAVG 300 DVFPRAYHCF SLSCIMQKIP ENLQGLFEYE AIRAALH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-101	FAR1 family protein