PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY67703.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

FAR1

Protein Properties

Length: 591aa MW: 68011.8 Da PI: 5.6421

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY67703.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68	2.4e-21	60	143	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn YAke GF vr+s++ ++ +++e ++ ++ Cs g++++++ + +r+etr gC a+++ +++++++w+++++eleHnH l+p GAY67703.1 60 FYNCYAKEQGFGVRVSNTWYR-KSREKYRGKLSCSSAGFKKKSEAN-----CPRPETRAGCPAMIEFRLMETKRWRIIEVELEHNHLLSP 143 9*************99997.66669**********99888.....9********************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 591 aa Download sequence
MSVDEVSLNT KPVGDDDTDD FEVVGDCAMT EYVGQTGITP NPLPPAVGME FETYDDVYYF 60 YNCYAKEQGF GVRVSNTWYR KSREKYRGKL SCSSAGFKKK SEANCPRPET RAGCPAMIEF 120 RLMETKRWRI IEVELEHNHL LSPRSGKFYK SHKHTGIGTK RTLHLDGAEE VQKIRLFRTL 180 IIDSEGNGNV DVNGVFGNNV NSSNQLKLKP GDAQAVQSFF CRLQLTDPNF FNVVDLNEKG 240 CLRNLFWTDT RSRVAYRYFG DVVLIDTTCL TERYDVPLVS FIGVNHHGQS VLLGCGLLAS 300 ETIESYTWPE EFEAALEDMI QPHGIKDHGW IQTLYEDRKR WAPVYLKEAY LSGVFSFLQN 360 EVSTSYFEGY LDKNTPLKEF LDKYDQALQE NYQLEALADM DSRNSSCIQK PGCYYEFQLS 420 KLYTNEMLRK FQTEVEAMYS CYSTKHSSSD GPITYIVKEE FEVGGNEKDS RAFDVLYNAS 480 DLEVLCVCGL FNFRGYLCRH ILCVLNQSGM QEIPSHYILS RWRKDVKRSY VLDHSCSAID 540 IKNPVHRFDD LYKRIVQVVE DGRQSQDRYK VTLQALDEIL KKLHLVEDHQ V

Sequence ? help Back to Top

Protein Sequence Length: 591 aa Download sequence

MSVDEVSLNT KPVGDDDTDD FEVVGDCAMT EYVGQTGITP NPLPPAVGME FETYDDVYYF  60
YNCYAKEQGF GVRVSNTWYR KSREKYRGKL SCSSAGFKKK SEANCPRPET RAGCPAMIEF  120
RLMETKRWRI IEVELEHNHL LSPRSGKFYK SHKHTGIGTK RTLHLDGAEE VQKIRLFRTL  180
IIDSEGNGNV DVNGVFGNNV NSSNQLKLKP GDAQAVQSFF CRLQLTDPNF FNVVDLNEKG  240
CLRNLFWTDT RSRVAYRYFG DVVLIDTTCL TERYDVPLVS FIGVNHHGQS VLLGCGLLAS  300
ETIESYTWPE EFEAALEDMI QPHGIKDHGW IQTLYEDRKR WAPVYLKEAY LSGVFSFLQN  360
EVSTSYFEGY LDKNTPLKEF LDKYDQALQE NYQLEALADM DSRNSSCIQK PGCYYEFQLS  420
KLYTNEMLRK FQTEVEAMYS CYSTKHSSSD GPITYIVKEE FEVGGNEKDS RAFDVLYNAS  480
DLEVLCVCGL FNFRGYLCRH ILCVLNQSGM QEIPSHYILS RWRKDVKRSY VLDHSCSAID  540
IKNPVHRFDD LYKRIVQVVE DGRQSQDRYK VTLQALDEIL KKLHLVEDHQ V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-81	FAR1 family protein