PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY67460.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 195aa MW: 22659.7 Da PI: 9.3385 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 87.8 | 2e-27 | 8 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdkev 92 lp Gf+F+P+deel+ +yLkkkv+g ++l+e i+++++y+ +P+++ + + ++++yfF++ +kk+++g+r r++ g+W+ k++ GAY67460.1 8 LPHGFQFRPSDEELIEHYLKKKVSGIFIPLAEYfIRDCNLYEKKPSEIWDshggPFLNADEDLYFFTQLKKKSSKGSRIDRKVGssGGTWQGEDAGKDI 106 699************************9998888**************632455333478899******************75544899********** PP NAM 93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +s ++ ++g kk + + k + + W+mhey+l GAY67460.1 107 VSGqSKIKIGSKKRFRYEK--QGCEDHGAWIMHEYTL 141 99745667********984..4444589*******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MQEHRPFLPH GFQFRPSDEE LIEHYLKKKV SGIFIPLAEY FIRDCNLYEK KPSEIWDSHG 60 GPFLNADEDL YFFTQLKKKS SKGSRIDRKV GSSGGTWQGE DAGKDIVSGQ SKIKIGSKKR 120 FRYEKQGCED HGAWIMHEYT LHLPKNQAAN YVLCRLRKNQ PSGHDIMNRF SWNIAKHDDW 180 FTTPSSIRIH ITCAN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G46590.1 | 6e-18 | NAC family protein |