PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY66610.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | MYB | ||||||||
Protein Properties | Length: 252aa MW: 28396.5 Da PI: 5.5189 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 63.1 | 5.7e-20 | 11 | 56 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd+ll+++v+++G ++W+ I++ ++ gR++k+c++rw + GAY66610.1 11 KGPWSPEEDQLLLKLVQRYGARNWSVISKSIP-GRSGKSCRLRWCNQ 56 79******************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 58.8 | 1.2e-18 | 65 | 107 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +T++Ede++++a++++G++ W+tIar ++ gRt++ +k++w++ GAY66610.1 65 TFTPDEDEIIIKAHARYGNK-WATIARLLN-GRTDNAIKNHWNST 107 69******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MDRDSVSERV KGPWSPEEDQ LLLKLVQRYG ARNWSVISKS IPGRSGKSCR LRWCNQLSPE 60 VEHRTFTPDE DEIIIKAHAR YGNKWATIAR LLNGRTDNAI KNHWNSTLKR KYAETTRSAL 120 AAGVDEDSED SDEREKKRSA VSVSGISCSP SGSDVSDSGL PVRVFESESR YNEVFDVSTD 180 LTLGLPVTEL KKCDSVSQRE NDSDDDKTSN TPSFGPEFLS VMQEMIRNEV RNYMEEAVRN 240 AGFKRIGISK ID |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37260.1 | 6e-64 | MYB family protein |