PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY66371.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | FAR1 | ||||||||
Protein Properties | Length: 259aa MW: 29026.7 Da PI: 6.7915 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 87.6 | 1.8e-27 | 143 | 232 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fYn+Y+ ++GF +r++++++skr+g+i+++ +vC+keg+r++ +++ ++k+ r r+ tr+gCka++ v+k++ gkw+vtk+++eH+H+l+ GAY66371.1 143 FYNAYGMRLGFITRINYHTRSKRDGSIISQSLVCNKEGYRKPPSSRhEVKSIRLRPPTRVGCKAMISVRKMSFGKWVVTKFVKEHTHALS 232 ****************************************99887747788899**********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MFFSKEELFI MEILVETIIQ NFLAAVDSRH GMGIQLKQND KDAQDKVSDD ANDNEQEDSI 60 LYSEIQLEQN SYEISGGTHF ITTDNEAHLG NEGTTIGSSV EMVSQVEKND KMTHSSGVQL 120 NTVGGDEPYV GQEFESVAAA HAFYNAYGMR LGFITRINYH TRSKRDGSII SQSLVCNKEG 180 YRKPPSSRHE VKSIRLRPPT RVGCKAMISV RKMSFGKWVV TKFVKEHTHA LSSTQGQTTV 240 LYRQIVVSSC PYTSRLVCI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59470.2 | 3e-45 | FAR1 family protein |