PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY66135.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | GRAS | ||||||||
Protein Properties | Length: 236aa MW: 26169 Da PI: 7.5342 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 280.3 | 5.8e-86 | 1 | 235 | 129 | 374 |
GRAS 129 lqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdev 227 +qaLa+Rp+g+p lRiTgvg+ e+ +etg+ L+++A++l+vpfef++ v ++ledl++++++ + gEalaVn v +lhr++ s +l + + GAY66135.1 1 MQALAARPGGAPFLRITGVGA----TIESAKETGRCLTELAHSLHVPFEFHP-VGEQLEDLKPHMFNRRVGEALAVNAVNRLHRVP--SNCLGN----L 88 9********************....99*************************.7*******************************9..666666....* PP GRAS 228 LklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkp 326 L ++++ P++v++veqea+hn++ Fl rfleal+yysa+fdsl+a++p++s +r+kvE+ ++++ei+n+vaceg er++rhe+lekWr+ +e GF+ GAY66135.1 89 LAMIRDQAPNIVTIVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPPDSAQRAKVEQYIFAPEIRNIVACEGGERTARHERLEKWRKIMEGKGFRG 187 *************************************************************************************************** PP GRAS 327 vplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 vpls +a++q k ll ++ dgyr+ e++g+l+lgW+dr+L+++SaWr GAY66135.1 188 VPLSANAVTQSKILLGLYSCDGYRLTEDNGCLLLGWQDRALLAASAWR 235 ***********************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MQALAARPGG APFLRITGVG ATIESAKETG RCLTELAHSL HVPFEFHPVG EQLEDLKPHM 60 FNRRVGEALA VNAVNRLHRV PSNCLGNLLA MIRDQAPNIV TIVEQEASHN GPYFLGRFLE 120 ALHYYSAIFD SLDATFPPDS AQRAKVEQYI FAPEIRNIVA CEGGERTARH ERLEKWRKIM 180 EGKGFRGVPL SANAVTQSKI LLGLYSCDGY RLTEDNGCLL LGWQDRALLA ASAWRC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66350.1 | 2e-65 | GRAS family protein |