PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY66043.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 387aa MW: 43228 Da PI: 6.8365

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY66043.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	176.6	6.8e-55	18	151	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.... 95 lppGfrFhPtdee++++yL++kv ++++++ +i evd++k+ePwdLp+k+k +eke yfF++rd+ky+tg r+nrat++gyWkatgkdke+++ GAY66043.1 18 LPPGFRFHPTDEEIITHYLTEKVMNTSFSA-CAIGEVDLNKSEPWDLPSKAKMGEKEFYFFCQRDRKYPTGMRTNRATEAGYWKATGKDKEIYKGnkgg 115 79***********************999.67***********99999************************************976666 PP NAM 96 ..kgelvglkktLvfykgrapkgektdWvmheyrle 129 +g lvg+kktLvfykgrapkgekt+Wvmheyrle GAY66043.1 116 vgGGGLVGMKKTLVFYKGRAPKGEKTNWVMHEYRLE 151 665666**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MEEAVVDHHN HRQGVIDLPP GFRFHPTDEE IITHYLTEKV MNTSFSACAI GEVDLNKSEP 60 WDLPSKAKMG EKEFYFFCQR DRKYPTGMRT NRATEAGYWK ATGKDKEIYK GNKGGVGGGG 120 LVGMKKTLVF YKGRAPKGEK TNWVMHEYRL EGKFSYYNLP KAAKDEWVVC RVFHKNIGGG 180 IKKIPIPGLP MNSSFGDDFF ANYASLPPLM DPPGSSSFGN GDHQNEFKPM NTASTSSRSY 240 NIPADNQNFL QPHQIPIQNQ IFSYHQNNNN PNPGYLHQGT IRTSTGAISS LMGAGFEGNG 300 DDQAILRALA STSHHHQQHN LESSSHCKVE QFSSNQSMIS RSQETGLSTD MNTTTEISSV 360 VSKQDNKSYD QDLDATSIAE LDSFWDY

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MEEAVVDHHN HRQGVIDLPP GFRFHPTDEE IITHYLTEKV MNTSFSACAI GEVDLNKSEP  60
WDLPSKAKMG EKEFYFFCQR DRKYPTGMRT NRATEAGYWK ATGKDKEIYK GNKGGVGGGG  120
LVGMKKTLVF YKGRAPKGEK TNWVMHEYRL EGKFSYYNLP KAAKDEWVVC RVFHKNIGGG  180
IKKIPIPGLP MNSSFGDDFF ANYASLPPLM DPPGSSSFGN GDHQNEFKPM NTASTSSRSY  240
NIPADNQNFL QPHQIPIQNQ IFSYHQNNNN PNPGYLHQGT IRTSTGAISS LMGAGFEGNG  300
DDQAILRALA STSHHHQQHN LESSSHCKVE QFSSNQSMIS RSQETGLSTD MNTTTEISSV  360
VSKQDNKSYD QDLDATSIAE LDSFWDY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18270.2	1e-104	NAC family protein