PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY66041.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 366aa MW: 41608.8 Da PI: 8.3374

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY66041.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	173.2	7.9e-54	11	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.... 95 lppGfrFhPtdeel+ +yLkkkv++ ++++ ++i++vdiyk++PwdLp+k++ +ekewyfFs+rd+ky++g r+nra++sgyWkatg+dk +l++ GAY66041.1 11 LPPGFRFHPTDEELILHYLKKKVASMPFPV-SIIADVDIYKFDPWDLPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKIILATsvga 108 79**************************.89***********988899**********************************9999998 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++e++g+kk Lvfykgr pkg+kt+W+mheyrl GAY66041.1 109 HQENIGVKKALVFYKGRPPKGVKTNWIMHEYRL 141 8899*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MVCIKNPESA LPPGFRFHPT DEELILHYLK KKVASMPFPV SIIADVDIYK FDPWDLPAKA 60 AFGEKEWYFF SPRDRKYPNG ARPNRAAASG YWKATGTDKI ILATSVGAHQ ENIGVKKALV 120 FYKGRPPKGV KTNWIMHEYR LAENPKNLNH TKMRPKDSSM RLDDWVLCRI YRKSHVSLPT 180 SAGAASDHDL EEEEEKFNLH DTLLPILRSP PSHNTTLNPQ KSSSFSNLLD AMDYSMLSNF 240 LSENQTSHTG SESNPLFNSG ILEQHHSSFN NGNGANTNTS CTNSFLIQKL PQLNYSVSNN 300 MENQQHKRPH PNIDHHENML HPSKKFITTC SFSSSTTDQF DPPYNYLHQP FLTQQLLLSP 360 HLQFQG

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MVCIKNPESA LPPGFRFHPT DEELILHYLK KKVASMPFPV SIIADVDIYK FDPWDLPAKA  60
AFGEKEWYFF SPRDRKYPNG ARPNRAAASG YWKATGTDKI ILATSVGAHQ ENIGVKKALV  120
FYKGRPPKGV KTNWIMHEYR LAENPKNLNH TKMRPKDSSM RLDDWVLCRI YRKSHVSLPT  180
SAGAASDHDL EEEEEKFNLH DTLLPILRSP PSHNTTLNPQ KSSSFSNLLD AMDYSMLSNF  240
LSENQTSHTG SESNPLFNSG ILEQHHSSFN NGNGANTNTS CTNSFLIQKL PQLNYSVSNN  300
MENQQHKRPH PNIDHHENML HPSKKFITTC SFSSSTTDQF DPPYNYLHQP FLTQQLLLSP  360
HLQFQG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.1	1e-120	NAC family protein