PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY65950.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 78aa    MW: 9131.1 Da    PI: 7.8477
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY65950.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.61.2e-122870145
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     ++ ++++E+ l+++  ++ G++ W++Ia +++ gRt++++k +w 
       GAY65950.1 28 KLEFSEDEETLIAKMYNLVGKR-WSLIAGRIP-GRTAEEIKKYWT 70
                     678*******************.*********.***********5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 78 aa     Download sequence    
MAELHRHTSH DNNSVHSREP KQPNQDSKLE FSEDEETLIA KMYNLVGKRW SLIAGRIPGR  60
TAEEIKKYWT SRYSSTNE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01380.12e-17MYB_related family protein