PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY65599.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 400aa    MW: 44746.9 Da    PI: 8.1535
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY65599.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.44.7e-20222271356
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                 ++GVr+++ +g+WvAeIr p++   r+r++lg+f+taeeAa a++ a+  l+ge
  GAY65599.1 222 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAEEAAMAYDTAAYMLRGE 271
                 8******9.**********955...5*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    
MENFMHKENY PSYFHGLATG SKFLGDQVTW GALSNASCQD DSSVESSSSA EEACGANLIN  60
KIPGFVKRDV VKEKNSSIPF VSGFDSVPVN FLESFPKLNR QAAANQVSDQ PPSSPSSLSN  120
FPNLTLFFQG SPMLNPSAAA DDDSLGNKDT SFAQLPQSSN EWLKMNQSLA NYSSKGFGDY  180
WLSTTKTQPM KYTGRKLQSQ HHHHQKCNSL EATAMASPGK LFRGVRQRHW GKWVAEIRLP  240
RNRTRVWLGT FDTAEEAAMA YDTAAYMLRG EYAHLNFPER KHQLKANSLN GNTATLLEAK  300
LQALSHQKPN NDQQQQQQKQ APTTKKNNIS HQENTSNTNK KLKEILESKV VIGSHHQELV  360
MENKKTHHHQ EVLDVDAVQL SRMPSLDMDT IWDSLLVPDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.17e-62ERF family protein