PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY65460.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | C2H2 | ||||||||
Protein Properties | Length: 224aa MW: 24613.3 Da PI: 6.3847 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.5 | 0.00011 | 71 | 93 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C + F++ L H+++H GAY65460.1 71 YTCTFCRREFRSAQALGGHMNVH 93 9********************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MAPELGLLSS TQHKKLAQSQ QNQPSPSLSP GKTWMLNQKR EPQEDDDSWE VRAFAEDTGN 60 IMGTTWPPRS YTCTFCRREF RSAQALGGHM NVHRRDRARL HHHQAQPHAS SSSSTLIIPT 120 TQEFTNSGYC LLYQLPNPNG GVFASTTMTA CAIDDSPSTL LSISPYPPNN LIGLPPSTNF 180 PAASQCYSTK DPLGSINDNS NACNESAIEE LDLELRLGQR PTPT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17810.1 | 2e-40 | C2H2 family protein |