PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY65008.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 178aa MW: 20965.9 Da PI: 9.3419 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 114.1 | 1.4e-35 | 5 | 132 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 +GfrF+Pt+ee++ + Lkkk + ++++ ++ike+d y+++PwdLp+ +++ eek wyf+++r k+a++k+++r tksgyWk tgk ++++k ++e GAY65008.1 5 VGFRFKPTNEEII-RLLKKKRLDPDFSV-HTIKEIDFYSFDPWDLPRhsEIQCEEKVWYFYCERYYKSAKSKQAHRRTKSGYWKVTGKGSDIKRKnSTE 101 7************.99*********999.78**************94357788999*************************************996677 PP NAM 99 lvglkktLvfy.kgrapkgektdWvmheyrl 128 ++g+kk+L f + +a+k kt+Wvmhe ++ GAY65008.1 102 VIGTKKILPFCpRRSASKKAKTEWVMHEISV 132 8**********766889999********876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MDSLVGFRFK PTNEEIIRLL KKKRLDPDFS VHTIKEIDFY SFDPWDLPRH SEIQCEEKVW 60 YFYCERYYKS AKSKQAHRRT KSGYWKVTGK GSDIKRKNST EVIGTKKILP FCPRRSASKK 120 AKTEWVMHEI SVEDDPLYKK DFVVCRLERK RDGELSTSTS VEDQSSPDLT SCSTIIHD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27300.1 | 9e-34 | NAC family protein |