PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY65004.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 179aa MW: 20807.1 Da PI: 5.3504 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 99.2 | 5.9e-31 | 2 | 130 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 G++F+P+d el+ + Lk+k + +++ + ik++ +i+++ePwdLp+ k+++e++ yfF + + ky++++r r t++g Wk t kd ++ + ++ GAY65004.1 2 ESGYKFQPSD-ELILRLLKEKRLNPHFSH-HPIKDIgHICSLEPWDLPTesKTESEDQVFYFFYEPRYKYRNSNRVDRRTEAGQWKITSKDSQIEA-GN 97 67*******9.6888******99999888.78****99**********523555566677***********************************9.99 PP NAM 98 elvglkktLvfy.kg.rapkgektdWvmheyrl 128 l+g+kk L+fy +g +++ ++ktdWv+hey++ GAY65004.1 98 GLTGTKKFLTFYcRGpDSKVPVKTDWVVHEYHA 130 9***********7555667788*********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 179 aa Download sequence |
MESGYKFQPS DELILRLLKE KRLNPHFSHH PIKDIGHICS LEPWDLPTES KTESEDQVFY 60 FFYEPRYKYR NSNRVDRRTE AGQWKITSKD SQIEAGNGLT GTKKFLTFYC RGPDSKVPVK 120 TDWVVHEYHA KDDPRYEKEF VLCCITNGEA SAYVDDGSET NTADNDAWVE ERSVILSSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10500.1 | 6e-20 | NAC family protein |