PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY65003.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 555aa MW: 62826.2 Da PI: 5.2624

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY65003.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	87.7	2.1e-27	7	134	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 +G++F+P+de l v Lk+k + ++ ik++ +i+++eP dL + ++++e++ +yfF + + ky++++r +r t++g Wk t +d ++ + +++ GAY65003.1 7 QGYKFQPSDE-LSVSLLKEKRLDPHFLY-GPIKDIgHICNLEPGDLATesETESEDQACYFFYEPHYKYRNSNRVHRRTEAGQWKITSEDSQIEA-SNR 102 79****96.55699999999988777.8899*****8423666678899*******************************9.999 PP NAM 99 lvglkktLvfykg..rapkgektdWvmheyrl 128 l g+kk L+fy+ ++ ++ktdWvmhey++ GAY65003.1 103 LSGTKKFLTFYRRspGSKVPVKTDWVMHEYHV 134 *******6522344557*******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 555 aa Download sequence
MESHLGQGYK FQPSDELSVS LLKEKRLDPH FLYGPIKDIG HICNLEPGDL ATESETESED 60 QACYFFYEPH YKYRNSNRVH RRTEAGQWKI TSEDSQIEAS NRLSGTKKFL TFYRRSPGSK 120 VPVKTDWVMH EYHVKDDPSY EKEFVLCCIK RKRKKKKKRG ISKADGGEPS QQLVSPPQQS 180 PSDRPISDGV HNTHTVPQQQ PQSHNSIYYP GNPTLQNTVY PRSITNDAPT QLPQIYHLIS 240 NRNHNAESIP TNQPNQNSIS YLGNRIEEYM YSLMNPTQQL ISARNYTEGS IPINQWPQPY 300 YNMNSHSGNQ VENGCPTNPL LTPDSYLESQ GPLHHPLVIS NFAGKNFQEE CLPPGEIKSY 360 GGYNRLNDAS FSAVQTPISQ EQELKYSNSS SDNCNFSDCQ VFSDDSPRAF QDENSRGETG 420 QTLTPDFDPS KSDGEASTNA NDSSDTNTAD DEALVKELLL KKDECLQIGE FKLEGGNNRL 480 NDASVDNCDF SNHQISCSEQ VNYLINSPRA FPDVVSREEL EKPFPLTLTH QSQMEELQFV 540 QRIAMTQTLL TTMHG

Sequence ? help Back to Top

Protein Sequence Length: 555 aa Download sequence

MESHLGQGYK FQPSDELSVS LLKEKRLDPH FLYGPIKDIG HICNLEPGDL ATESETESED  60
QACYFFYEPH YKYRNSNRVH RRTEAGQWKI TSEDSQIEAS NRLSGTKKFL TFYRRSPGSK  120
VPVKTDWVMH EYHVKDDPSY EKEFVLCCIK RKRKKKKKRG ISKADGGEPS QQLVSPPQQS  180
PSDRPISDGV HNTHTVPQQQ PQSHNSIYYP GNPTLQNTVY PRSITNDAPT QLPQIYHLIS  240
NRNHNAESIP TNQPNQNSIS YLGNRIEEYM YSLMNPTQQL ISARNYTEGS IPINQWPQPY  300
YNMNSHSGNQ VENGCPTNPL LTPDSYLESQ GPLHHPLVIS NFAGKNFQEE CLPPGEIKSY  360
GGYNRLNDAS FSAVQTPISQ EQELKYSNSS SDNCNFSDCQ VFSDDSPRAF QDENSRGETG  420
QTLTPDFDPS KSDGEASTNA NDSSDTNTAD DEALVKELLL KKDECLQIGE FKLEGGNNRL  480
NDASVDNCDF SNHQISCSEQ VNYLINSPRA FPDVVSREEL EKPFPLTLTH QSQMEELQFV  540
QRIAMTQTLL TTMHG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	150	156	KRKRKKK
2	150	158	KRKRKKKKK
3	151	157	KRKRKKK
4	151	159	KRKRKKKKK
5	151	155	RKRKK
6	152	158	KRKRKKK
7	153	159	KRKRKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.2	2e-19	NAC family protein