PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY64459.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

FAR1

Protein Properties

Length: 690aa MW: 80178.1 Da PI: 6.2895

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY64459.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	77.3	3e-24	71	162	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y+++A++ GFs+rk++s++s++ g i++r+fvC+++g+++++kk+++++ r r++ r+gC+akl ++ke +w+v+++++ HnHel GAY64459.1 71 EYYSNFARKNGFSIRKARSTESQNLG-IYRRDFVCYRSGFNQPRKKANVEHPRDRKSVRCGCDAKLYLTKEIvdgVTQWYVSQFSNVHNHELL 162 69******************8888.**************************************998766789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 690 aa Download sequence
MAMKPPTNIW IRRQQCPCGD WKCYIKYEGD DQASTSSQQE KTETTSSLLS SEVVFTPYVG 60 QIFKSDDEAF EYYSNFARKN GFSIRKARST ESQNLGIYRR DFVCYRSGFN QPRKKANVEH 120 PRDRKSVRCG CDAKLYLTKE IVDGVTQWYV SQFSNVHNHE LLEDDQVRML PAYRKIQEAD 180 QERILLLSKA GFPVNRIVKV LELEKGVQPG QLPFIEKDVR NFVRTCKKTV QENDALLTEK 240 RENDTLELFE ACKNMAERDV DFVYDYTTDE NEKVENIAWS FGDSIRAYTL FGDVVTFDTS 300 YRSITYGLLL GVWFGMDNHG KAIFFGCVLL QDESTHSFAW ALQTFVRFMR GRHPQTILTD 360 IDLGLRDSIA RELPNTKHVV CIWHILSKLS SWFSSLLGSQ YEEFKAEFDM LCRLESVEDF 420 EHQWNHFVAR FGLVSDKHVA LLFSYRAFWL FSYIRGYFLA RMMTVEFSQS VDTFFKKILS 480 EQTCLQVFFE QVCAAAFGNS TREGVQYVHI KTCMPIEEHA RSILTPYAFR VLQHEIVLST 540 QYATTEMTNG SYLVRHYKKM DGEYLVIWIP EDEQIHCSCK EFEHSGILCR HSLGVLVVKN 600 YFQLPEKYLL LRWRLENSLV TMEDPNPQSS SDECAQAFHS LAAALLTESM ISKERFSYVH 660 KELTGLLDHV RNMPETNEFV VNMPAHNASD

Sequence ? help Back to Top

Protein Sequence Length: 690 aa Download sequence

MAMKPPTNIW IRRQQCPCGD WKCYIKYEGD DQASTSSQQE KTETTSSLLS SEVVFTPYVG  60
QIFKSDDEAF EYYSNFARKN GFSIRKARST ESQNLGIYRR DFVCYRSGFN QPRKKANVEH  120
PRDRKSVRCG CDAKLYLTKE IVDGVTQWYV SQFSNVHNHE LLEDDQVRML PAYRKIQEAD  180
QERILLLSKA GFPVNRIVKV LELEKGVQPG QLPFIEKDVR NFVRTCKKTV QENDALLTEK  240
RENDTLELFE ACKNMAERDV DFVYDYTTDE NEKVENIAWS FGDSIRAYTL FGDVVTFDTS  300
YRSITYGLLL GVWFGMDNHG KAIFFGCVLL QDESTHSFAW ALQTFVRFMR GRHPQTILTD  360
IDLGLRDSIA RELPNTKHVV CIWHILSKLS SWFSSLLGSQ YEEFKAEFDM LCRLESVEDF  420
EHQWNHFVAR FGLVSDKHVA LLFSYRAFWL FSYIRGYFLA RMMTVEFSQS VDTFFKKILS  480
EQTCLQVFFE QVCAAAFGNS TREGVQYVHI KTCMPIEEHA RSILTPYAFR VLQHEIVLST  540
QYATTEMTNG SYLVRHYKKM DGEYLVIWIP EDEQIHCSCK EFEHSGILCR HSLGVLVVKN  600
YFQLPEKYLL LRWRLENSLV TMEDPNPQSS SDECAQAFHS LAAALLTESM ISKERFSYVH  660
KELTGLLDHV RNMPETNEFV VNMPAHNASD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein