PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY64380.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family HSF
Protein Properties Length: 265aa    MW: 30539 Da    PI: 5.5372
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY64380.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind109.32.8e-34311222102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl k+y ++ed++++++isw+ +g+ fvv+++ efa+++Lp+ Fkhsnf+SFvRQLn+YgF+kv +++         weF ++ F+kg+k+ll+ki+
    GAY64380.1  31 FLLKTYMLIEDPATDNVISWNGDGTGFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSR---------WEFCNQMFRKGEKDLLCKIR 118
                   9****************************************************************999.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+k 
    GAY64380.1 119 RRKA 122
                   *985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MEATNNITIS SCCDDNKGLL EYARKSTPPP FLLKTYMLIE DPATDNVISW NGDGTGFVVW  60
QPAEFARDLL PTLFKHSNFS SFVRQLNTYG FRKVATSRWE FCNQMFRKGE KDLLCKIRRR  120
KAWANRQQAA TAAATQQESH DEDQRSSSST SSLSEYNTLR DENKRLKKEN GNLSSELVSM  180
KRKCKELLDL VTKYANMDND DDDDDDDDED DDDHEINNNQ RGPLIVKLFG VRFEVDEGER  240
ERKRKRKRAE IISQSANILL SQSCK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1242247RKRKRK
2242248RKRKRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41690.16e-65HSF family protein