PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY64250.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | B3 | ||||||||
Protein Properties | Length: 113aa MW: 12977.8 Da PI: 8.4498 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 38.2 | 2.6e-12 | 21 | 88 | 20 | 83 |
HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEE CS B3 20 kkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFk 83 + ++e+ g+ s+ l++ede+g++W ++l +r+++ r ++++GW+ Fv +++ ++gD vvF GAY64250.1 21 SNTIDEFflafeAGQ--YSQNLVVEDENGERWPFRLFIRQGPYRkPTISAGWRCFVMSKQAEVGDQVVFI 88 333333344434444..4568***************88777766699**********************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 113 aa Download sequence |
MEVYSKILTE TDVSTRLAVE SNTIDEFFLA FEAGQYSQNL VVEDENGERW PFRLFIRQGP 60 YRKPTISAGW RCFVMSKQAE VGDQVVFIKE RAGAIGSAFR YKIRVSKTTE AIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19850.1 | 1e-10 | ARF family protein |