PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY63861.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

AP2

Protein Properties

Length: 304aa MW: 33626.7 Da PI: 5.3464

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY63861.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	55.3	1.6e-17	19	70	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr ++ +g+++AeIrd + g r +lg+f taeeAa+a+++a+ +++g GAY63861.1 19 HYRGVRKRP-WGKFAAEIRDSTRHG-GPRLWLGTFSTAEEAARAYDRAAFAMRG 70 6******.******44433.4***********************98 PP
2	AP2	56	9.9e-18	198	249	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrd + g r +lg+f taeeAa+a+++a+ +++g GAY63861.1 198 RYRGVRRRP-WGKFAAEIRDSTRHG-APRLWLGTFTTAEEAARAYDRAAFAMRG 249 69*****.******43333.5***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence
MEGINRGKKK EEEEETSVHY RGVRKRPWGK FAAEIRDSTR HGGPRLWLGT FSTAEEAARA 60 YDRAAFAMRG PLAILNFPDE HFSSGVGSSS SSSSSSSSST SSSLSSSSSS SSSSSSSSSS 120 SSSSSSSSSV FQNVETGGTD HEGGGKEVFE IEYFDDKLLE DLLNFEERRR VNISYIVIIM 180 EKVGRRSKEK EEEATSVRYR GVRRRPWGKF AAEIRDSTRH GAPRLWLGTF TTAEEAARAY 240 DRAAFAMRGP TAVLNFPNEH FLSGKVERGG GTNEGEKEVF EIEYLDDQLL EDLLNFDDDK 300 TKND

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G04370.1	3e-20	ERF family protein