PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY63651.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family BBR-BPC
Protein Properties Length: 514aa    MW: 57651.2 Da    PI: 9.2506
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY63651.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind334.62.6e-10213101300
   GAGA_bind   1 mdddgsre.rnkg.yye................paaslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkl 81 
                 mdd  +++ r k  yy+                p+++l   +++++m+++aerda+irern+al+ek++a+ +rd a+ +rdkalaer++al+ rd++l
  GAY63651.1   1 MDDGHHENgRYKMeYYKgthaqwnmmpqhqmkePNNALV--MNKKIMAILAERDAAIRERNIALTEKREALETRDQALEERDKALAERDDALMARDSAL 97 
                 88888888999988999*******998766643335555..99******************************************************** PP

   GAGA_bind  82 lalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkek.kakkkkkksekskkkvk 179
                 +al+++e ++++++    +  +g k +++     ++   ++a +  +++ ++a+pi+  ++e+k ++ k+++++++++k +   +k+kk +e+ +kkv+
  GAY63651.1  98 AALQYREAAANFSS--VGGFQRGGKRMHHPAY--QSGDVPEALNSGDMHATDAKPITIIPSETKPHQAKRAKENKTVTKPSvSPRKVKKVGEDLNKKVA 192
                 *****999977655..5677899999998887..3444566677899********99877777655544444444444433145688999999999999 PP

   GAGA_bind 180 kesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGyd 278
                 +++  ++ k+e++s+d +ln v++De+t+PvPvC+CtG+++qCYkWGnGGWqS+CCttt+S yPLP+++++r+aR++grKmS+++f+klL++LaaeG+d
  GAY63651.1 193 SDG--KKIKSEWDSQD-GLNLVNFDETTMPVPVCTCTGTPHQCYKWGNGGWQSSCCTTTLSSYPLPQMPNKRHARVGGRKMSGSVFTKLLSRLAAEGHD 288
                 999..57*********.9********************************************************************************* PP

   GAGA_bind 279 lsnpvDLkdhWAkHGtnkfvti 300
                 ls p+DLk++WAkHGtn+++ti
  GAY63651.1 289 LSVPLDLKNFWAKHGTNRYITI 310
                 *********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 514 aa     Download sequence    
MDDGHHENGR YKMEYYKGTH AQWNMMPQHQ MKEPNNALVM NKKIMAILAE RDAAIRERNI  60
ALTEKREALE TRDQALEERD KALAERDDAL MARDSALAAL QYREAAANFS SVGGFQRGGK  120
RMHHPAYQSG DVPEALNSGD MHATDAKPIT IIPSETKPHQ AKRAKENKTV TKPSVSPRKV  180
KKVGEDLNKK VASDGKKIKS EWDSQDGLNL VNFDETTMPV PVCTCTGTPH QCYKWGNGGW  240
QSSCCTTTLS SYPLPQMPNK RHARVGGRKM SGSVFTKLLS RLAAEGHDLS VPLDLKNFWA  300
KHGTNRYITI NLGGFAEFHV AIICSAESSF QAKLSSWIAI MIAFFDLPNP RIFTLFMISS  360
TVTFCLGIAL ILEWGLYSQY HPGYHWIVYY APCLISLPIL TWMFCILFAT FVADKDQNLR  420
ILPSLDPSIS MQSQSWDMHH RQPKIKEGRL VEEKCQLEKV SASTNRLALV PIQPVHDPPS  480
VSIKVEAAKA KTSNDDKSTL KRTLSLSLFG NKFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21240.11e-121BBR-BPC family protein