PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY63294.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | bHLH | ||||||||
Protein Properties | Length: 220aa MW: 25427.2 Da PI: 9.2453 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.9 | 2.8e-11 | 53 | 103 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 + +E++RRd+++s ++L +l+P+ +ka++ ls + L +A+ YIk+L+ GAY63294.1 53 KNIEKNRRDHMKSLCFKLFSLVPShHFKASKSMLSQEDQLDLACCYIKQLR 103 579*********************999999999****************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MIFPFRNCLY NGLHNSSDSF NSLYNLSYWR EEVSKEWKRM KKRSDQSSKL DRKNIEKNRR 60 DHMKSLCFKL FSLVPSHHFK ASKSMLSQED QLDLACCYIK QLRERIDKLN RMKGQAMKSI 120 KPNSNNNIMD ETNNICSNLP VVELRDLGSS IEVVLISGVQ RNFMLYEVIS ILEEEGAQVV 180 SASFSTIGDK IFHTVRAQAK ISRLGVETSI ACQRLHDLVD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 1e-24 | bHLH family protein |