PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY63222.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 217aa    MW: 24268.9 Da    PI: 6.8816
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY63222.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83.2e-19655154
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54
                ++++GVr+++ +g+Wv+eIr+p        +r++lg+f taeeAa+a+++a+  + 
  GAY63222.1  6 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFETAEEAARAYDQAAILMS 55
                59*******9.**********8.....334*********************98776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MVQSNKKFRG VRQRHWGSWV SEIRHPLLKR RVWLGTFETA EEAARAYDQA AILMSGRNAK  60
TNFPVTQSSN GDPAQPSESS SSSSPTNELS QLLHAKLRKC SKTPSPSMTC LRLDTENSHI  120
GVWQKRAGQR SDSNWVMTVH LGNRNSGDHT NVNNNADDVS GNALPLAADS QSQGPELMIR  180
TEMDDEERIA LQMIEELLNR NCPSPSYEVQ EKADDHQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.12e-66ERF family protein