PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY63088.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 195aa    MW: 21317.1 Da    PI: 10.3991
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY63088.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2643.1e-20554154
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54
                ++++GVr+++ +g+Wv+eIr+p        +r++lg+fgtaeeAa+a+++a+  l 
  GAY63088.1  5 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFGTAEEAARAYDEAAILLS 54
                59*******9.**********8.....334*********************98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MVHSKKFRGV RQRHWGSWVS EIRHPLLKRR VWLGTFGTAE EAARAYDEAA ILLSGRSAKT  60
NFPVITNGEG GSSDQNTATS PTPSLSSKLS AKLRKSCKSP SPSLTCLRLD TENSHIGVWQ  120
KRAGPRSDSN WVMTVELGKM KINGEASSST SSKPKLTKPQ AVQEMGGRKD LVGGGGLDEE  180
ERVALQMIEE LLNEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.19e-57ERF family protein