PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY62950.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 127aa MW: 14889.1 Da PI: 10.5138 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.9 | 8.5e-19 | 24 | 79 | 2 | 56 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++++f++eq++ Le+ Fe+ + ++ +++ + A++lgL+ rqV +WFqN+Ra++k GAY62950.1 24 KNKRRFSDEQIRLLESIFESeSTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWK 79 56789**************88**********************************9 PP | |||||||
2 | HD-ZIP_I/II | 124.1 | 6.4e-40 | 25 | 114 | 2 | 90 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeee.kLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +krr+s+eq++lLE+ Fe+e+ kLep++K+++a+eLglqprqva+WFqn+RAR+k+kq+E+dy++L+++yd+l++ e+L ke+e+L e GAY62950.1 25 NKRRFSDEQIRLLESIFESEStKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSLASGFESLIKEKESLLLE 114 79****************9999***************************************************************99755 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 127 aa Download sequence |
MIERRKDDSA ASPEAKRKKK SKMKNKRRFS DEQIRLLESI FESESTKLEP RKKMQVATEL 60 GLQPRQVAIW FQNKRARWKS KQIEHDYAQL RANYDSLASG FESLIKEKES LLLEVIIAFP 120 ESNFSGN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 4 | 20 | RRKDDSAASPEAKRKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61890.1 | 2e-33 | HD-ZIP family protein |