PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY62653.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 234aa MW: 25991.8 Da PI: 10.0778 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 69.4 | 9.5e-22 | 13 | 131 | 7 | 128 |
NAM 7 FhPtd.eelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkya..tgkrknratksgyWkatgkdkevlsk.kgelvg 101 F Ptd + vv+y k+k + ++i+e+d+++v + +ek+ yfFs+ ++++a ++ + + a+ sgyWk gk++++l++ ++++vg GAY62653.1 13 FAPTDgKSSVVHYVKRKFGPLP--GLSIIPELDVVSVSSLWFG-----QEKKRYFFSNIRNESAidNDGKCKIAAGSGYWKPVGKNRQILASgTKQVVG 104 89999445788*****998777..4468********9765553.....67899***99888877434555555999**************9967778** PP NAM 102 lkktLvfykgrapkgektdWvmheyrl 128 ++ktL+f +g++ + +kt+Wvmh+y+l GAY62653.1 105 IRKTLIFCEGKRGHETKTQWVMHQYHL 131 *************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MGETKSKLCV NGFAPTDGKS SVVHYVKRKF GPLPGLSIIP ELDVVSVSSL WFGQEKKRYF 60 FSNIRNESAI DNDGKCKIAA GSGYWKPVGK NRQILASGTK QVVGIRKTLI FCEGKRGHET 120 KTQWVMHQYH LVAIATNTNL TQPVFKMVII GDWVVYRIFQ RKKKPKKRGV VSSNNLNITK 180 NSHKNQLQVI DFSVIEADQT DLLGPPPQPV SSCSSEITAD ELSPSVLDQE ETSA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 160 | 167 | QRKKKPKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 9e-29 | NAC family protein |