PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY62317.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

TALE

Protein Properties

Length: 669aa MW: 73920.4 Da PI: 7.5988

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY62317.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	33.7	6.2e-11	408	445	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++++LAk++gLt +qV++WF N R + GAY62317.1 408 FEHflHPYPKDSDKQQLAKQTGLTRSQVSNWFINARVR 445 664459******************************88 PP
2	BELL	120.3	8.5e-39	273	344	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +rqelq+kkakL+++l+eV++rYkqy++q+q+v+s+Fe++ag gsak+Yt+lAl++iS++FrcLkdai+ qi GAY62317.1 273 QRQELQIKKAKLVNMLDEVEQRYKQYHHQMQVVVSAFEQAAGFGSAKSYTALALRTISKQFRCLKDAISAQI 344 69********************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 669 aa Download sequence
MATYFHLNPS EIQAGDGGGM QTLYLMNPSY DYTTSLPNNT LLLNPVNLSH APPSNDHQQQ 60 QHPLVGIPLP HAASSSHDHQ DNIPGGGVHY DLWSSIDQNS SQNNQTHMAS LAAASNSSAP 120 LGLLRPVASV PNRQQGLSLS LSSQQVAAYN RPINNNNNSI EVDDLHKGRG LQQGQVTESS 180 PSSVSVVTSS GINSSTQSAI LGSKYLKAAQ ELLDEVVKVE SMIIKGSDHH HHSAKAAQIK 240 ETMKMNRESI DGDQELNGTG DSTKSSFELT TAQRQELQIK KAKLVNMLDE VEQRYKQYHH 300 QMQVVVSAFE QAAGFGSAKS YTALALRTIS KQFRCLKDAI SAQIKATSKK LGEDDCLGAK 360 AEGSRLRFID HQIRQQRALQ HLGMQHHAWR PQRGLPERAV TILRAWLFEH FLHPYPKDSD 420 KQQLAKQTGL TRSQVSNWFI NARVRLWKPM VEEMYMEELK EQEKNGSAEN ISKTESKESP 480 QLLEQIKSLQ AKAEKSATQI APTELSNSTM STSPMGGNFR QQTGFNLIGP SDHHLEGFVQ 540 RSQKKPRNAE MQNSRSSIND PGGGFGMFSM RPEIGRFNPD NHHHHHQLAA PTFHGNNGVS 600 LTLGLPHCEN LSLSGSQHNL LSSGQNIEPD HFCGIETPQH NSHSGTAYES IDIQSRKRFA 660 AQLLPDFVT

Sequence ? help Back to Top

Protein Sequence Length: 669 aa Download sequence

MATYFHLNPS EIQAGDGGGM QTLYLMNPSY DYTTSLPNNT LLLNPVNLSH APPSNDHQQQ  60
QHPLVGIPLP HAASSSHDHQ DNIPGGGVHY DLWSSIDQNS SQNNQTHMAS LAAASNSSAP  120
LGLLRPVASV PNRQQGLSLS LSSQQVAAYN RPINNNNNSI EVDDLHKGRG LQQGQVTESS  180
PSSVSVVTSS GINSSTQSAI LGSKYLKAAQ ELLDEVVKVE SMIIKGSDHH HHSAKAAQIK  240
ETMKMNRESI DGDQELNGTG DSTKSSFELT TAQRQELQIK KAKLVNMLDE VEQRYKQYHH  300
QMQVVVSAFE QAAGFGSAKS YTALALRTIS KQFRCLKDAI SAQIKATSKK LGEDDCLGAK  360
AEGSRLRFID HQIRQQRALQ HLGMQHHAWR PQRGLPERAV TILRAWLFEH FLHPYPKDSD  420
KQQLAKQTGL TRSQVSNWFI NARVRLWKPM VEEMYMEELK EQEKNGSAEN ISKTESKESP  480
QLLEQIKSLQ AKAEKSATQI APTELSNSTM STSPMGGNFR QQTGFNLIGP SDHHLEGFVQ  540
RSQKKPRNAE MQNSRSSIND PGGGFGMFSM RPEIGRFNPD NHHHHHQLAA PTFHGNNGVS  600
LTLGLPHCEN LSLSGSQHNL LSSGQNIEPD HFCGIETPQH NSHSGTAYES IDIQSRKRFA  660
AQLLPDFVT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	1e-115	TALE family protein