PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY62120.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 203aa MW: 23146.2 Da PI: 4.619 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 104 | 2e-32 | 8 | 126 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGf+F Ptdeelv ++L +k++ +++ ++i+e++ ++Pw+L+ ++ + ++wyfFs+ + +r+t +gyWk+ +++v+++ g++ GAY62120.1 8 LPPGFKFLPTDEELVLHFLYPKASLLPCHP-NIIPELNPQLHDPWQLNGRALCSGNRWYFFSQIED--------KRVTGNGYWKQLDFEEPVINSAGKK 97 79*************************999.89**************976667899******9866........599********************** PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +g+kk +vf g+ap g++t+W+m+ey+l GAY62120.1 98 IGMKKYFVFCVGEAPLGVETNWIMQEYHL 126 ***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MCDRTINLPP GFKFLPTDEE LVLHFLYPKA SLLPCHPNII PELNPQLHDP WQLNGRALCS 60 GNRWYFFSQI EDKRVTGNGY WKQLDFEEPV INSAGKKIGM KKYFVFCVGE APLGVETNWI 120 MQEYHLCSCG ASANKSYKRR GNRILVSEGC CKWVLCRVYE EDGNSKGFCH GDDDDDDNGT 180 ELSCLDEMFL SLDDDLSDVS FPN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64530.1 | 2e-54 | NAC family protein |