PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY62110.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 571aa MW: 64684.6 Da PI: 4.7569

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY62110.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	76.7	5.3e-24	12	131	8	128
NAM 8 hPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglk 103 +P+d el+ + Lkkk + +++ ike+ +i+++ePwdL + ++++e++ +yfF k + y++++ ++rat++g Wk t k ++ + ++ l+g+k GAY62110.1 12 QPSD-ELILCLLKKKRLDPHFSY-GPIKEIgHICSLEPWDLATesETDSEDQTCYFFYKPR--YTKSNDAHRATNAGSWKVTRKVSQIEA-RNGLTGTK 105 5776.7999******999999.8899*****84235566777889999875..5667799***************9.8889 PP NAM 104 ktLvfy.kgrapkgektdWvmheyrl 128 k+L+fy +g +k t+W mhey++ GAY62110.1 106 KSLTFYlRGLPRKEAITEWGMHEYHV 131 **888899999*******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 571 aa Download sequence
MESHMREWYK SQPSDELILC LLKKKRLDPH FSYGPIKEIG HICSLEPWDL ATESETDSED 60 QTCYFFYKPR YTKSNDAHRA TNAGSWKVTR KVSQIEARNG LTGTKKSLTF YLRGLPRKEA 120 ITEWGMHEYH VKDDPSYEKE FVLCRIFRRR NKKKRGISTT DEGESSEQLV SSPQQSPSDH 180 SISNGNHSEE STHTIPQQQL QYHNSISYPR NLNLQNTFAY PQSITDDSPT QLSPGNHSEG 240 TTHTYPQQLP NHNSISYTGN RIEQNMYLLK YPWVMPNYSP TQQLPCDHFI SARNYSEEYV 300 PINQQPQPND NLISHLGNQI EGFSPTNSLL PQNSNLEWQL HHPLEMHNSA ENTFQEGCQP 360 IGEITSYGGY NRLNDASFSA VQAPISQEQG LKYSNSSFDN CDFSDCQIFS DASPKAFQDE 420 SSCGEPGQTL TPHFNPSQSD GEVLAYAVNS SDTNTADNYA WVKESLLEKD KGLLIGELKS 480 YGGNNRLNEA SFSFSDNCDF SDSEIYSDEQ LLNCLRAFLD EISGEETGKT ISPDFNVSKS 540 DGEASAYAKD SSDTNTAYND AWLKERLENF A

Sequence ? help Back to Top

Protein Sequence Length: 571 aa Download sequence

MESHMREWYK SQPSDELILC LLKKKRLDPH FSYGPIKEIG HICSLEPWDL ATESETDSED  60
QTCYFFYKPR YTKSNDAHRA TNAGSWKVTR KVSQIEARNG LTGTKKSLTF YLRGLPRKEA  120
ITEWGMHEYH VKDDPSYEKE FVLCRIFRRR NKKKRGISTT DEGESSEQLV SSPQQSPSDH  180
SISNGNHSEE STHTIPQQQL QYHNSISYPR NLNLQNTFAY PQSITDDSPT QLSPGNHSEG  240
TTHTYPQQLP NHNSISYTGN RIEQNMYLLK YPWVMPNYSP TQQLPCDHFI SARNYSEEYV  300
PINQQPQPND NLISHLGNQI EGFSPTNSLL PQNSNLEWQL HHPLEMHNSA ENTFQEGCQP  360
IGEITSYGGY NRLNDASFSA VQAPISQEQG LKYSNSSFDN CDFSDCQIFS DASPKAFQDE  420
SSCGEPGQTL TPHFNPSQSD GEVLAYAVNS SDTNTADNYA WVKESLLEKD KGLLIGELKS  480
YGGNNRLNEA SFSFSDNCDF SDSEIYSDEQ LLNCLRAFLD EISGEETGKT ISPDFNVSKS  540
DGEASAYAKD SSDTNTAYND AWLKERLENF A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27300.1	5e-19	NAC family protein