PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY62084.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 241aa MW: 28363.3 Da PI: 6.4183 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 24.3 | 8.9e-08 | 2 | 36 | 1 | 36 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevike 36 +p+GfrF+Ptdeel+ + L+ kv+g++++l+ +++e GAY62084.1 2 VPKGFRFNPTDEELI-QILESKVSGQQMPLHFTLPE 36 589************.88*********988555555 PP | |||||||
2 | NAM | 39.5 | 1.7e-12 | 36 | 113 | 55 | 128 |
NAM 55 ekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlsk..kgel.....vglkktLvfy.....kgrapkgektdWvmheyrl 128 e+e y ++ r++ +r + +g Wkat + k+++++ + +g k+ L+f+ + +++++ kt+W+mhey+l GAY62084.1 36 ENERYCYCMREND-------SReVSGRGWWKATSHVKKIYATnnN--GscadvIGYKRPLTFHkfkdtRRNRSNAIKTNWIMHEYTL 113 4555666665543.......3437789**************8551..245555**********7766546777889*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MVPKGFRFNP TDEELIQILE SKVSGQQMPL HFTLPENERY CYCMRENDSR EVSGRGWWKA 60 TSHVKKIYAT NNNGSCADVI GYKRPLTFHK FKDTRRNRSN AIKTNWIMHE YTLHSLSTDW 120 TLCKIKYKGK PSVQEELEDI RNDYRLRVNN DFEASSSSSI SVTNMDMQQH SADSVAEQQL 180 QQQQQQPQPL QQLEQQQQYA SYDPFSTQTM STGYDYFNDH DHQLEQAHTS EQPFTTLWSW 240 Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 5e-18 | NAC family protein |