PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY61213.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 335aa    MW: 37669.1 Da    PI: 7.897
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY61213.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM157.45.8e-49171431128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
                 + pGfrF+Ptd el+++yLkkk+eg++  + evi+e++i+++ePwdLp k+v ++++ew+fF+ r +ky++g++++rat+ gyWkatgk+++v+s +++
  GAY61213.1  17 MFPGFRFSPTDVELISFYLKKKMEGSEKCV-EVISEIEICRYEPWDLPaKSVIQSDNEWFFFCARGRKYPNGSQSRRATELGYWKATGKERNVKS-GSN 113
                 579************************777.99***************667777899**************************************.99* PP

         NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                 ++g+k+tLvf+ grapkge+t+W+mhey +
  GAY61213.1 114 VIGTKRTLVFHIGRAPKGERTEWIMHEYCM 143
                 ****************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MAGVSRETQM SIEASSMFPG FRFSPTDVEL ISFYLKKKME GSEKCVEVIS EIEICRYEPW  60
DLPAKSVIQS DNEWFFFCAR GRKYPNGSQS RRATELGYWK ATGKERNVKS GSNVIGTKRT  120
LVFHIGRAPK GERTEWIMHE YCMQGGSQDS LVVCRLRKNS EFRLNKTSTR ASQHRRVHNS  180
NCAVSEGGTD QTGMSEGDKA VECSSKKCSS SHDSYSIEQT DSASEAEEKL LDDVNPTESS  240
SHQKDCPGEE DFYADILKDD IINLDSLSAM LPLPPALASQ QETGRNSQQQ GETFSFQAGP  300
FQGTASRRIK LRKQKLGLCR FRELSSEKSK RQESK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22290.12e-99NAC family protein