PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY61140.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | C2H2 | ||||||||
Protein Properties | Length: 177aa MW: 20234.5 Da PI: 7.0725 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.4 | 5.4e-05 | 39 | 61 | 3 | 23 |
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+F + +L++H +H GAY61140.1 39 CSyeGCGKTFIDAASLRKHAHSH 61 77779**************9888 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MSFVRLCSEK TLKALKEKAK EPEAPEPEPE PTTEVLFLCS YEGCGKTFID AASLRKHAHS 60 HGERQYQCHW KAICIDDLSG EAKKFLDSSK LKDTFLFILE KEITYVLMKA VVSLLYPVIA 120 EDIMGFSKQD SVRRFDCHTI LSVMYPIQGD PMMLKSQAGK WRIMEFSLEN CHYAKAT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G06634.3 | 2e-18 | C2H2 family protein |