PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY60730.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 354aa MW: 40605.9 Da PI: 4.1446

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY60730.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	63.7	5.6e-20	10	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk.......kvkaeek...ewyfFskrdkkyatgkrknratksgyWkatgk 88 lp+GfrF+Ptdee+v++yLk +++ ++ + i+ +d+y Pw++ + + +++ e f++ ++ k+a+ +r +r++ g+W+ + + GAY60730.1 10 LPVGFRFNPTDEEIVKHYLKGDAATLPCL--KDIEYCDVYGDkSPWEIFQleknnpdN---HDNdygENIFYVYTKLKKASPNRISRVAGCGTWQFQKR 103 79*****************99998854..469*9764895333443322...2233447789999999999999************* PP NAM 89 dkevlsk.....kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++++ ++ ++g k+ f k W+mhey+l GAY60730.1 104 PVQIYDAdpnenDNVVIGYKRKYSFK-------AKEPWIMHEYSL 141 *975554444446666666664.......5678****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MKRSIISCFL PVGFRFNPTD EEIVKHYLKG DAATLPCLKD IEYCDVYGDK SPWEIFQLEK 60 NNPDNHDNDY GENIFYVYTK LKKASPNRIS RVAGCGTWQF QKRPVQIYDA DPNENDNVVI 120 GYKRKYSFKA KEPWIMHEYS LAAGKERSSP CGGDDDGDNF VFCRIINKSK TGNEHQEAKA 180 KAETEAESSG GYVGSNNLMI DDNKINQFEL GLQADDQALL KYGLALDDDA EEVTSFARNN 240 KDDVMLLDDE LEPILHIDTK DWNLTMLQKY FMDDDDIDRV DESSRASSSV EFANYLQNAE 300 GVMTLEYSED FGYRIEENDY LRMNEVQQPA VVLQESEVDE FIEELLMNDV CDNQ

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MKRSIISCFL PVGFRFNPTD EEIVKHYLKG DAATLPCLKD IEYCDVYGDK SPWEIFQLEK  60
NNPDNHDNDY GENIFYVYTK LKKASPNRIS RVAGCGTWQF QKRPVQIYDA DPNENDNVVI  120
GYKRKYSFKA KEPWIMHEYS LAAGKERSSP CGGDDDGDNF VFCRIINKSK TGNEHQEAKA  180
KAETEAESSG GYVGSNNLMI DDNKINQFEL GLQADDQALL KYGLALDDDA EEVTSFARNN  240
KDDVMLLDDE LEPILHIDTK DWNLTMLQKY FMDDDDIDRV DESSRASSSV EFANYLQNAE  300
GVMTLEYSED FGYRIEENDY LRMNEVQQPA VVLQESEVDE FIEELLMNDV CDNQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	6e-19	NAC family protein