PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY60630.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 453aa MW: 51551.9 Da PI: 4.5308

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY60630.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	85.4	1.1e-26	8	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdkev 92 lp Gf+F+P+deelv +yLkkk++g +++l+e ++++++y+ +P+++ + + ++++yfF++ +kk+++g+r r++ g W+ k++ GAY60630.1 8 LPHGFQFRPSDEELVEHYLKKKISGIPIPLAEYfVTDCNLYDKKPSEIWDshggPFLNADEDMYFFTQLKKKSSKGSRIDRKVGssGGAWQGEDAGKDI 106 699**********************9998888**********63245533347899***************75544899****** PP NAM 93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +s ++ ++g kk + + k + + W+mhey+l GAY60630.1 107 VSGqSKIKIGSKKRFRYEK--KGCEDHGAWIMHEYTL 141 99745667****984..4444589*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MQEHRPFLPH GFQFRPSDEE LVEHYLKKKI SGIPIPLAEY FVTDCNLYDK KPSEIWDSHG 60 GPFLNADEDM YFFTQLKKKS SKGSRIDRKV GSSGGAWQGE DAGKDIVSGQ SKIKIGSKKR 120 FRYEKKGCED HGAWIMHEYT LHLPKNQATN YVLCRLRKNQ PTGQDKKFCS AKKRKLKDFQ 180 ENNNQSEQVT DSEMERVLTH QQNRQQNDVH YQEVSCSSTG MMSEQSLSGG MGFASSVAEH 240 SAVTDQMQQH QCQQILIQNS ECHYEPSMEM MMSNFDQMLY NQQCDSGNNM LQSRETGGNC 300 HCDSESIADA MAVPESLVQQ EDCDALPELI EEDYSFLEEL LCNDAQEPIG DGESIDETDG 360 MDHSSTVAEK QFEAFVVVLD QSVQNSSLQE NQQQRECQSK ETFAISSDHD YESSISQRRE 420 SGGVDYELES IHQLLLSGQN DCDLMLDLEH IWS

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MQEHRPFLPH GFQFRPSDEE LVEHYLKKKI SGIPIPLAEY FVTDCNLYDK KPSEIWDSHG  60
GPFLNADEDM YFFTQLKKKS SKGSRIDRKV GSSGGAWQGE DAGKDIVSGQ SKIKIGSKKR  120
FRYEKKGCED HGAWIMHEYT LHLPKNQATN YVLCRLRKNQ PTGQDKKFCS AKKRKLKDFQ  180
ENNNQSEQVT DSEMERVLTH QQNRQQNDVH YQEVSCSSTG MMSEQSLSGG MGFASSVAEH  240
SAVTDQMQQH QCQQILIQNS ECHYEPSMEM MMSNFDQMLY NQQCDSGNNM LQSRETGGNC  300
HCDSESIADA MAVPESLVQQ EDCDALPELI EEDYSFLEEL LCNDAQEPIG DGESIDETDG  360
MDHSSTVAEK QFEAFVVVLD QSVQNSSLQE NQQQRECQSK ETFAISSDHD YESSISQRRE  420
SGGVDYELES IHQLLLSGQN DCDLMLDLEH IWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G46590.1	4e-18	NAC family protein