PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY60502.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ERF | ||||||||
Protein Properties | Length: 187aa MW: 20430.8 Da PI: 5.1031 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54 | 4.2e-17 | 34 | 83 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++GVr ++ +g++v+eIr p e ++r++lg+fg+ae+Aa+a++ a+ +l+g GAY60502.1 34 PFRGVRKRR-WGSYVSEIRLPGE---KTRIWLGSFGSAEKAARAYDSAAFYLKG 83 69****887.**********944...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence |
MSVTTQTQEP SQLQPGSSTS KPGSKKRTRQ NDTPFRGVRK RRWGSYVSEI RLPGEKTRIW 60 LGSFGSAEKA ARAYDSAAFY LKGNLATLNF PASAGALPRP ESCSRKDIQV AAAKAAALVE 120 MGDRIESECS GSGGEPDCGD WWERETTASD EVKVAPLLSP PRFDSDIGEL YCWMDDDNFL 180 LGSCLEL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 25 | 42 | KKRTRQNDTPFRGVRKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60490.1 | 3e-28 | ERF family protein |