PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY60455.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family Trihelix
Protein Properties Length: 270aa    MW: 32162.9 Da    PI: 6.357
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY60455.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix72.95.5e-231596186
    trihelix  1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
                +W ++e+++Li +r e e++l   k++k+ We vs k+rerg++r+p qCk+kw+nl +ryk  ++++ +    s ++cp+f++l+
  GAY60455.1 15 QWGNEETRDLIVIRGEAERDLVGIKRNKTIWEIVSVKLRERGYSRTPDQCKCKWKNLVNRYKGKETSDPD----SGRQCPFFNELH 96
                7**************************************************************9999997....4678******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MMTSSSSSAH AQAVQWGNEE TRDLIVIRGE AERDLVGIKR NKTIWEIVSV KLRERGYSRT  60
PDQCKCKWKN LVNRYKGKET SDPDSGRQCP FFNELHAVFT ERAKNMQRLL AESEAGSMQA  120
KKRFKRLNAD ELSDEEDDDE EQSEEEEEEE ERPARGNSRK RKIERNVSDK SPRATSGTAG  180
IHEMLKAFFD QQQRMEVEWR QMMERRAQER QLFEEEWRQR MEKLERERLL VEQAWREKEE  240
QRRIREESRA ERRDALLTTL LTKLINQNNP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38250.16e-36Trihelix family protein