PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY60265.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 359aa    MW: 39495.7 Da    PI: 6.5227
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY60265.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.82e-21159208255
         AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+W+AeIrd +     + +r++lg+f+tae+Aa+a+++a+++++g
  GAY60265.1 159 KYRGVRQRP-WGKWAAEIRDpF-----KaARVWLGTFDTAEDAARAYDEAALRFRG 208
                 8********.**********66.....56*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MCCCMPNVAN QRRDKKKKEG DQHHEERLSE VDQGVNYQPL MQYSDDQRRR WKEREMSAMV  60
SALKHVVAGD IDVVVSQPQQ IQQHDNMNAI TNVTSTAANS GSSSSYGITS GQKRAREMEG  120
GGVRATESSS TSTSTAMQAT ARYEYSSNEK SIVPEPRRKY RGVRQRPWGK WAAEIRDPFK  180
AARVWLGTFD TAEDAARAYD EAALRFRGNK AKLNFPENVK LVAISSSSSS STNANPMATQ  240
LTVSDSPATL LPISTSAEPI VHSQALDHLP NAEVSTDFLD YSFLVSDFSE FQMQPMTSYL  300
SSSFASASTT SPPPSSLPLF FPAQPPVQFM PPKSESDSSP DFSVPPWNAS NYYPSSSSG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11118QRRDKKKK
21219RRDKKKKE
31319RDKKKKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64750.13e-32ERF family protein