PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY60047.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

CPP

Protein Properties

Length: 793aa MW: 87621.8 Da PI: 5.5507

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY60047.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	48.1	2.3e-15	452	491	2	41
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 ++k+CnCkkskClk+YC+Cfaag +C ++C Ce+C+Nk e GAY60047.1 452 DCKRCNCKKSKCLKLYCDCFAAGIYCIDSCACESCFNKPE 491 689**********************************975 PP
2	TCR	52.5	9.7e-17	538	576	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkkskClkkYCeCf+a++ Cs+ C+Ce+C+N+ GAY60047.1 538 RHKRGCNCKKSKCLKKYCECFQANVGCSDGCRCEGCSNS 576 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 793 aa Download sequence
MESPEGDRIK ATSLSTPGSS PAVQESPVFN FISNLSPINS VKAARYTQRF FETQFPTPPP 60 VFRTPRLDLQ RETSFLKSND ADAASRGYGD CGNRMSTVLV PCIQKELQSC SPSGCVDDYL 120 TDPVEVEGCS NSNELCVQPA KNVSKLSSSG FNSPTITSPK VNGANDRNSE DFMHMLPDQA 180 EEDPLRSLAL FETAIEQRDA ESFDGSHKLT PTEKADQNVM LQNTGTQHNG QDGSSQSPKN 240 LQNVEADKNS SENVGPVSTG LLKSWSRIIH RRIIEYDSKI SHSSHNVTQE SDNSTLPASF 300 RDWESLIPSD IESREVSSGR EATSSSQNVA SRLSFCQSEF VRSSQNEESL PLIGPLPPGF 360 SLHLSSMAEL MPISSDLMPT GRIHDYMKND QQDDQAVVGA SLVISQSTDS MKQISDSLQM 420 TLSEQQAAPC EGMMLTSEIE EKKASNSSES EDCKRCNCKK SKCLKLYCDC FAAGIYCIDS 480 CACESCFNKP EFEETVTDTR QQIQSRNPLA FAPKIVGHAD SAANVVEDGN LTTPASARHK 540 RGCNCKKSKC LKKYCECFQA NVGCSDGCRC EGCSNSFGRK TESKYQKVQR WENQSHVKLD 600 AAANVTDSTK TRTIKPFSAR WEDLPDMSHL TPLSYSYPEA EASSVSPSMR DFQNVRRAHL 660 HQESSFQSSV NPHWQSPMSS MPQFHEDFAE HNRRSSYSKV HDTTKEDNMP EIQKDTSTPS 720 NASKADVPNR KQISPPQFQS QELRSSSTQG GLESDRKFSW KNVPSFPPLT PYSKSKDDIG 780 QTGSDFKGHP NDN

Sequence ? help Back to Top

Protein Sequence Length: 793 aa Download sequence

MESPEGDRIK ATSLSTPGSS PAVQESPVFN FISNLSPINS VKAARYTQRF FETQFPTPPP  60
VFRTPRLDLQ RETSFLKSND ADAASRGYGD CGNRMSTVLV PCIQKELQSC SPSGCVDDYL  120
TDPVEVEGCS NSNELCVQPA KNVSKLSSSG FNSPTITSPK VNGANDRNSE DFMHMLPDQA  180
EEDPLRSLAL FETAIEQRDA ESFDGSHKLT PTEKADQNVM LQNTGTQHNG QDGSSQSPKN  240
LQNVEADKNS SENVGPVSTG LLKSWSRIIH RRIIEYDSKI SHSSHNVTQE SDNSTLPASF  300
RDWESLIPSD IESREVSSGR EATSSSQNVA SRLSFCQSEF VRSSQNEESL PLIGPLPPGF  360
SLHLSSMAEL MPISSDLMPT GRIHDYMKND QQDDQAVVGA SLVISQSTDS MKQISDSLQM  420
TLSEQQAAPC EGMMLTSEIE EKKASNSSES EDCKRCNCKK SKCLKLYCDC FAAGIYCIDS  480
CACESCFNKP EFEETVTDTR QQIQSRNPLA FAPKIVGHAD SAANVVEDGN LTTPASARHK  540
RGCNCKKSKC LKKYCECFQA NVGCSDGCRC EGCSNSFGRK TESKYQKVQR WENQSHVKLD  600
AAANVTDSTK TRTIKPFSAR WEDLPDMSHL TPLSYSYPEA EASSVSPSMR DFQNVRRAHL  660
HQESSFQSSV NPHWQSPMSS MPQFHEDFAE HNRRSSYSKV HDTTKEDNMP EIQKDTSTPS  720
NASKADVPNR KQISPPQFQS QELRSSSTQG GLESDRKFSW KNVPSFPPLT PYSKSKDDIG  780
QTGSDFKGHP NDN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	5e-66	CPP family protein