PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY59522.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 182aa    MW: 20404.6 Da    PI: 4.65
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY59522.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.51.1e-153381254
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54
                +ykG+r++k +g+Wv+eIr+p   g +  r +lg++ t e Aa a++ a  +l+
  GAY59522.1 33 KYKGIRRRK-WGKWVSEIRVP---G-SqERLWLGSYATQEAAAMAHDVAFYCLR 81
                8*****998.**********8...4.35**********99*****999988887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MTISSQLEAL LHKSTSGEGM GSNIEENAAH QRKYKGIRRR KWGKWVSEIR VPGSQERLWL  60
GSYATQEAAA MAHDVAFYCL RRPRSLDGLN FPSMLPASVV HAELSPKSVQ KAASDAGMGV  120
DAQMVLNKDK TDENENENSG ATQVLDEKQF WEYDYEFEDC GTSEEGELDI SVEDYLKTQV  180
DH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22810.18e-46ERF family protein