PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY59154.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

YABBY

Protein Properties

Length: 176aa MW: 19643.4 Da PI: 9.3138

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY59154.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	192.5	2e-59	12	149	22	170
YABBY 22 lavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevprvppvirPPe 120 l vsvP +slf++vtvrCGhC++ll vn+ a q+++ ++ +l++++ + e+++++ + ++s+ ++ ss e ++e+pr+pp irPPe GAY59154.1 12 LGVSVPCSSLFNIVTVRCGHCANLLNVNMVSALQAVPLQDP-------QLQKQHINLEDSITK-DCGSSSKCNKFSSA--FETAEHETPRMPP-IRPPE 99 77*************************999999999985.......332222222222222.22233333333332..35678999999.9** PP YABBY 121 krqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 krqrvPsaynrfikeeiqrikasnPdishreafs+aaknWahfP+ihfgl GAY59154.1 100 KRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGL 149 **********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 176 aa Download sequence
MATNVLVFLF FLGVSVPCSS LFNIVTVRCG HCANLLNVNM VSALQAVPLQ DPQLQKQHIN 60 LEDSITKDCG SSSKCNKFSS AFETAEHETP RMPPIRPPEK RQRVPSAYNR FIKEEIQRIK 120 ASNPDISHRE AFSTAAKNWA HFPHIHFGLK LDGNKQAKLD KAAAYAEGTQ KSNGFY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08465.1	8e-68	YABBY family protein