PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY59014.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 264aa    MW: 29812.3 Da    PI: 8.0347
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY59014.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.64.9e-21110160155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 ++++GVr+++ +grW+AeIrdp   ++rkr +lg+f+t+eeAa  +++a+ kl+g
  GAY59014.1 110 KKFRGVRRRP-WGRWAAEIRDP---NRRKRLWLGTFDTPEEAASVYDQAAVKLKG 160
                 59********.**********8...335************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MSPKSDMIIK FTEHVVTTDK PIISTPAPQK LVRIILTDAD ATDSSSDDEQ VINHVRRVKR  60
HVKQINLNNH HRRQHQQQQR GQQSNKLQHN KKIKRHAHQP PPQSDVTHRK KFRGVRRRPW  120
GRWAAEIRDP NRRKRLWLGT FDTPEEAASV YDQAAVKLKG ANAVTNFPNP VLTGDDVVNG  180
QRQRTGVDSF DSSDISSLSS PTSVLRYDEF TPFDSCLCYG DGDGDVFGFG CEVPLCPPDL  240
MLSGTSLSED AFGEFDVNDF LVEV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15694RRVKRHVKQINLNNHHRRQHQQQQRGQQSNKLQHNKKIK
2116135RRRPWGRWAAEIRDPNRRKR
3132159RRKRLWLGTFDTPEEAASVYDQAAVKLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.13e-29ERF family protein