PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY58646.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Trihelix

Protein Properties

Length: 337aa MW: 37803.6 Da PI: 9.9739

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY58646.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	48.9	1.7e-15	47	128	1	84
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdq 84 +W++ v +L+ea++ ++ +r+klk+++Weev++++ ++ ++++qCk+k+e+++kry+ + +++ + s++ ++ + GAY58646.1 47 EWSEGAVSCLLEAYEAKWVLRNRAKLKGHDWEEVARYVsaraNNTKSPKTQTQCKNKIESMKKRYRSESANADG------SSWLLYPR 128 5***********************************87766777788999*************9988776......24666655 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MEKENNINPL ENVNPSLLLA NNIKEESPRK QVGGGGGGSN DRLKRDEWSE GAVSCLLEAY 60 EAKWVLRNRA KLKGHDWEEV ARYVSARANN TKSPKTQTQC KNKIESMKKR YRSESANADG 120 SSWLLYPRLD LLLRGNNSQQ PQQQQQQQQQ QHSQPQPVSF HPPLLLIEPS PAVPQPPAPP 180 GAPPPPPPSQ PQNSHGSNGV DHIMAKEDGV GTKFSDHPSD KKVMDTDSST PALYSDKEKL 240 RSKKLKTKME RKRRGKGEDW EIAESIRWLA EVVVRSEQAR MDTMREIEKM RTEAEAKRGE 300 LDLKRTEIIA NTQLEIAKLF AAANAKGVDS SLRIGRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54390.1	6e-95	Trihelix family protein