PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY57941.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

ERF

Protein Properties

Length: 466aa MW: 51924.4 Da PI: 5.4752

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY57941.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	55	2.1e-17	219	269	2	56
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+WvAeIr p++ r+r +lg+f+ ae+Aa a+++ + kl+ge GAY57941.1 219 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDRAEDAALAYDREAFKLRGE 269 59****9.******955...5************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MAASKNSSKS EKGVDEATEE MVRSQDWEID EGKDFDLSSF ERRQQWRPVL DEASVSQRPL 60 KKIRSPERHQ NPVKFSSSFD YQSPSISSVS PASASTLGSS SSRLVFPFAF DTSQQAIQFP 120 QQFPTSQLQT PLPNFHPPIQ PAQTQQQMIS FSAHQQQQGF PFFAGESMLP HQQHQRQLLQ 180 YWSDALNLSP RGRLMMNRIG PDGRPLFRPQ AQPLNTTKLY RGVRQRHWGK WVAEIRLPRN 240 RTRLWLGTFD RAEDAALAYD REAFKLRGEN ARLNFPELFL NKDKAAVSTD PGSNISSPPT 300 PYESSMPNRL QAQHAQNSLN SQVMSSEPIP APPPQPKVEI PDSESGLGSS EATASDEVLA 360 AAEGSGSGEG VSGSQELAWG EMAEAWFNAI PAGWGPGSPV WDDFDSSNNL LMPANLPFVN 420 QSQQEFPDSD RQRQHDNSVS AASSTSPPCP MKPFFWKDQD HPQDSS

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MAASKNSSKS EKGVDEATEE MVRSQDWEID EGKDFDLSSF ERRQQWRPVL DEASVSQRPL  60
KKIRSPERHQ NPVKFSSSFD YQSPSISSVS PASASTLGSS SSRLVFPFAF DTSQQAIQFP  120
QQFPTSQLQT PLPNFHPPIQ PAQTQQQMIS FSAHQQQQGF PFFAGESMLP HQQHQRQLLQ  180
YWSDALNLSP RGRLMMNRIG PDGRPLFRPQ AQPLNTTKLY RGVRQRHWGK WVAEIRLPRN  240
RTRLWLGTFD RAEDAALAYD REAFKLRGEN ARLNFPELFL NKDKAAVSTD PGSNISSPPT  300
PYESSMPNRL QAQHAQNSLN SQVMSSEPIP APPPQPKVEI PDSESGLGSS EATASDEVLA  360
AAEGSGSGEG VSGSQELAWG EMAEAWFNAI PAGWGPGSPV WDDFDSSNNL LMPANLPFVN  420
QSQQEFPDSD RQRQHDNSVS AASSTSPPCP MKPFFWKDQD HPQDSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20880.1	1e-56	ERF family protein