PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY57785.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 285aa MW: 32940.9 Da PI: 4.9173

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY57785.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	132	4.4e-41	9	115	1	106
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPtdeelv +yL+kkv+++k++l +vi+++d+y++ePwdL++ ++e++ewyfFs++dkky+tg+r+nrat +g+Wkatg+dk+v++ k GAY57785.1 9 VPPGFRFHPTDEELVGYYLRKKVASQKIDL-DVIRDIDLYRIEPWDLQErcrIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYD-K 105 69**************************.9***********953432233667**********************************.9 PP NAM 97 gelvglkktL 106 ++l+g++ktL GAY57785.1 106 SKLIGMRKTL 115 99*****9 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MMESMESYVP PGFRFHPTDE ELVGYYLRKK VASQKIDLDV IRDIDLYRIE PWDLQERCRI 60 GYEEQNEWYF FSHKDKKYPT GTRTNRATMA GFWKATGRDK AVYDKSKLIG MRKTLEEGWV 120 VCRAFKKRAT GHTKSIDGWD SSYFYDEPSG VSSVVDPIEY VSRQPQSLLA QNLMCKQEIE 180 AENLSFLQAA DQYLQLPQLE SPSLPILKRP SSISLTSENS AEEEQNRVNN INNNCNNANK 240 KVTDWRALDK FVASQLSQED RCEGESSFGA HDDNSDMALL LLQEW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18060.1	1e-117	NAC family protein