PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY56959.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NAC | ||||||||
Protein Properties | Length: 167aa MW: 19651.5 Da PI: 9.8221 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 33.3 | 1.4e-10 | 8 | 112 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 lp Gf+F+P+deel+++yLkkkv g + l+e i++ y++ L+ ++++yfF++ +kk+++g+ + +++ +v+ GAY56959.1 8 LPHGFQFRPSDEELIKHYLKKKVLGILILLAEYfIRD---YSHGGPLLN-----VDEDLYFFTQLKKKSSKGELTAKSVP-----------PVVL---G 84 699**********************997775543554...444444454.....46899********9998877766533...........5666...2 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 + + k + f k + + W+mhey+l GAY56959.1 85 KGRMPKWFRFEK--KGCEAHGAWIMHEYTL 112 346778888873..3333467888888876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 167 aa Download sequence |
MQEHRPFLPH GFQFRPSDEE LIKHYLKKKV LGILILLAEY FIRDYSHGGP LLNVDEDLYF 60 FTQLKKKSSK GELTAKSVPP VVLGKGRMPK WFRFEKKGCE AHGAWIMHEY TLHFPKNQAT 120 NYVLCRLRKN QPTGQDKEYG SENKRKLNDF RHNSNQSEQV TDTDVER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04060.1 | 9e-07 | NAC family protein |