PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY56740.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

bHLH

Protein Properties

Length: 523aa MW: 55437.5 Da PI: 6.5077

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY56740.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.7	7.6e-12	317	362	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq GAY56740.1 317 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 362 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 523 aa Download sequence
QHTKFPLSLS LSLLPVLTYL VFNIHQKNGF HSLEETLDSS NLNFHIVKTY SQEIKMQPCS 60 SSGEMQGISS LLSNGSHEQQ SQIHQSATFD PTSQDDFLEQ MLSSLPSCSW TDLKSPWGVV 120 DLNPNNNNNN INNKQPRDLS DETAPSTTQE NNVPAGFQFD ESMILASKMR QHQISGNTGS 180 GNNNSAAAKF MMQQQQQIMM AAARGGIGLP LSLGNGGDND IVDVSSFKSQ QGGDGSVQAL 240 YNGFTGSLHG STQPQHFHHL QGGSMPGQTF GAPGPVMNQT QAQASGSTGG GGGGGNTPAQ 300 QPKQRVRARR GQATDPHSIA ERLRRERIAE RMKALQELVP NANKTDKASM LDEIIDYVKF 360 LQLQVKVLSM SRLGGAAAVA PLVADMSSEG GGGDCIQANG RNPNGAQTTS ANDSLTVTEH 420 QVAKLMEEDM GSAMQYLQGK GLCLMPISLA TAISTATCHS RNPIISTSNN NNNNGNPHHN 480 PLLQSNGEGP TSPSMSVLTV QSATMGNGGA DGSVKDAASV SKP

Sequence ? help Back to Top

Protein Sequence Length: 523 aa Download sequence

QHTKFPLSLS LSLLPVLTYL VFNIHQKNGF HSLEETLDSS NLNFHIVKTY SQEIKMQPCS  60
SSGEMQGISS LLSNGSHEQQ SQIHQSATFD PTSQDDFLEQ MLSSLPSCSW TDLKSPWGVV  120
DLNPNNNNNN INNKQPRDLS DETAPSTTQE NNVPAGFQFD ESMILASKMR QHQISGNTGS  180
GNNNSAAAKF MMQQQQQIMM AAARGGIGLP LSLGNGGDND IVDVSSFKSQ QGGDGSVQAL  240
YNGFTGSLHG STQPQHFHHL QGGSMPGQTF GAPGPVMNQT QAQASGSTGG GGGGGNTPAQ  300
QPKQRVRARR GQATDPHSIA ERLRRERIAE RMKALQELVP NANKTDKASM LDEIIDYVKF  360
LQLQVKVLSM SRLGGAAAVA PLVADMSSEG GGGDCIQANG RNPNGAQTTS ANDSLTVTEH  420
QVAKLMEEDM GSAMQYLQGK GLCLMPISLA TAISTATCHS RNPIISTSNN NNNNGNPHHN  480
PLLQSNGEGP TSPSMSVLTV QSATMGNGGA DGSVKDAASV SKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	322	327	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	1e-68	bHLH family protein